If you’re a fan of tangy lemon desserts and crave the perfect blend of zesty citrus with a soft, buttery cookie base, this Lemon Bar Cookie Cups Recipe is about to become your new favorite treat. Imagine luscious lemon filling nestled inside delicate cookie cups—each bite bursting with brightness balanced by the subtle sweetness of the crust. These bite-sized delights are as fun to eat as they are to make, bringing a fresh twist to the classic lemon bar and transforming it into a charming and portable dessert your friends and family will rave over.

Ingredients You’ll Need
This recipe calls for a handful of simple, pantry-friendly ingredients that each play a vital role in creating the perfect texture, flavor, and visual appeal. From the rich, creamy butter forming the cookie base to the fresh lemon juice that gives the filling its irresistible zing, every component contributes to the magic of the Lemon Bar Cookie Cups Recipe.
- 1 cup unsalted butter, softened: Provides a rich, tender texture and buttery flavor for the cookie crust.
- 1/2 cup granulated sugar: Adds sweetness and helps with the structure of both crust and filling.
- 1/2 cup brown sugar: Brings a deeper, caramel-like sweetness and moistness to the cookie dough.
- 1 large egg: Binds the cookie dough together and adds moisture.
- 1 tsp vanilla extract: Enhances the flavor profile with warm, aromatic undertones.
- 2 1/4 cups all-purpose flour: The foundation for the cookie cups, providing structure and chewiness.
- 1/2 tsp baking powder: Gives a slight lift to the cookie dough for a tender crumb.
- 1/4 tsp salt: Balances sweetness and depth of flavor.
- 2 large eggs: Essential for the lemon filling’s silky, smooth texture.
- 3/4 cup granulated sugar: Sweetens the lemon filling perfectly without overpowering the citrus notes.
- 1 tbsp all-purpose flour: Helps thicken the lemon filling for a custard-like consistency.
- 1/4 cup fresh lemon juice: The star ingredient, lending bright, tangy freshness to the filling.
- Zest of 1 lemon: Intensifies the lemon flavor with a fragrant, citrusy kick.
- Powdered sugar (for dusting): Adds a delicate sweetness and pretty finishing touch.
How to Make Lemon Bar Cookie Cups Recipe
Step 1: Prepare the Cookie Crust
Start by preheating your oven to 350°F (175°C), then grease a 12-cup muffin tin or line it with cupcake liners to prevent sticking. In a large bowl, cream together the softened butter, granulated sugar, and brown sugar until the mixture becomes light and fluffy—this step is your first indicator of the delicious texture to come.
Step 2: Mix Wet Ingredients for the Crust
Beat in the large egg and vanilla extract to the creamed butter and sugars until everything is well combined. This adds moisture and richness to the dough, binding ingredients while infusing subtle, fragrant notes.
Step 3: Combine Dry Ingredients
Whisk together the all-purpose flour, baking powder, and salt in a separate bowl. Gradually add this dry mixture to the wet ingredients, mixing just until a dough forms. Avoid over-mixing to keep your cookie cups tender and soft.
Step 4: Shape the Cookie Cups
Divide the dough evenly among the muffin cups. Press the dough firmly into the bottom and slightly up the sides of each cup, shaping it carefully so you get a perfect little shell that will cradle the lemon filling.
Step 5: Bake the Cookie Cups
Bake for about 8 to 10 minutes or until the edges turn a lovely light golden color. Remove the tin from the oven and gently press the center of each cookie cup with the back of a spoon to keep the shape intact. Let them cool slightly while you prepare the filling.
Step 6: Prepare the Lemon Filling
In a medium bowl, whisk together the eggs, granulated sugar, flour, fresh lemon juice, and lemon zest until the mixture is smooth and glossy. This filling will set into a tangy custard, giving your cookie cups their signature bright flavor.
Step 7: Fill and Bake Again
Pour the lemon filling into each cookie cup, filling almost to the top but not overflowing. Return the filled muffin tin to the oven and bake for an additional 12 to 15 minutes until the filling sets and the cookie edges become golden brown.
Step 8: Cool and Dust
Allow your Lemon Bar Cookie Cups to cool completely in the muffin tin before gently removing them. Once cooled, sprinkle a dusting of powdered sugar over the tops for that classic, irresistible finish.
How to Serve Lemon Bar Cookie Cups Recipe

Garnishes
Enhance the visual appeal and flavor by adding a thin lemon slice, a sprinkle of extra lemon zest, or a sprig of fresh mint on top. These little touches highlight the citrus notes and make the presentation truly elegant.
Side Dishes
Serve your lemon bar cookie cups alongside a scoop of vanilla ice cream or a dollop of whipped cream for an indulgent contrast to their tartness. A light berry salad can also complement the cups beautifully, balancing the tang with natural sweetness.
Creative Ways to Present
Put a playful spin on your serving style by arranging the cookie cups on a pretty dessert platter with edible flowers, or place them in decorative mini cupcake wrappers for parties. For gatherings, pair each cup with a small cocktail or mocktail featuring citrus flavors to echo the lemon’s brightness.
Make Ahead and Storage
Storing Leftovers
You can keep your lemon bar cookie cups fresh by storing them in an airtight container at room temperature for up to two days. If your kitchen is warm, it’s better to refrigerate them, which can extend their freshness for about 4 days.
Freezing
These cookie cups freeze wonderfully. Lay them in a single layer on a baking sheet, freeze until firm, then transfer to a freezer-safe container or bag. Freeze for up to 2 months. When ready to enjoy, thaw them overnight in the refrigerator.
Reheating
To enjoy the best taste and texture after refrigeration or freezing, warm your lemon bar cookie cups briefly in a 300°F oven for 5-7 minutes or until warmed through. This helps the cookie base revive its softness and the lemon filling regain its luscious texture without melting.
FAQs
Can I use bottled lemon juice instead of fresh?
Fresh lemon juice is always preferred for the brightest, freshest flavor in the filling, but in a pinch, good quality bottled lemon juice can work. Just keep in mind that the flavor might not be as vibrant.
What if I don’t have a muffin tin?
If you don’t have a 12-cup muffin tin, mini tart pans or even a small baking dish can work, though the baking time and shape will vary slightly. Adjust baking time and check often to avoid over-browning.
How do I know when the lemon filling is set?
The filling should look firm and no longer jiggle when you gently shake the pan. It should hold its shape and be slightly springy to the touch.
Can these be made gluten-free?
Yes! Simply swap the all-purpose flour for a gluten-free flour blend that measures cup-for-cup. Just make sure the blend you choose is suitable for baking.
Are these suitable for freezing after baking?
Absolutely. Freeze your cooled lemon bar cookie cups for later enjoyment. Thaw them slowly and warm gently for the best texture and flavor.
Final Thoughts
Creating these delightful Lemon Bar Cookie Cups Recipe is like embarking on a little citrus-flavored adventure right in your kitchen. Their balance of sweet, tangy, and buttery elements makes for a dessert that’s perfect any time you want to brighten up your day or impress loved ones with something homemade and special. I can’t wait for you to try this recipe and make it one of your go-to favorites for sharing smiles and scrumptious moments.
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Lemon Bar Cookie Cups Recipe
- Prep Time: 15 minutes
- Cook Time: 30 minutes
- Total Time: 45 minutes
- Yield: 12 servings
- Category: Dessert
- Method: Baking
- Cuisine: American
Description
These Lemon Bar Cookie Cups combine a buttery, soft cookie crust with a tangy, creamy lemon filling for a delightful handheld dessert. Perfectly baked in a muffin tin, they offer the classic lemon bar flavors in a fun and easy-to-serve form, topped with a light dusting of powdered sugar.
Ingredients
Cookie Crust
- 1 cup unsalted butter, softened
- 1/2 cup granulated sugar
- 1/2 cup brown sugar
- 1 large egg
- 1 tsp vanilla extract
- 2 1/4 cups all-purpose flour
- 1/2 tsp baking powder
- 1/4 tsp salt
Lemon Filling
- 2 large eggs
- 3/4 cup granulated sugar
- 1 tbsp all-purpose flour
- 1/4 cup fresh lemon juice
- Zest of 1 lemon
Topping
- Powdered sugar (for dusting)
Instructions
- Prepare the Cookie Crust: Preheat your oven to 350°F (175°C). Grease a 12-cup muffin tin or line it with cupcake liners to prevent sticking.
- Cream Butter and Sugars: In a large mixing bowl, cream together the softened butter, granulated sugar, and brown sugar until the mixture becomes light and fluffy, ensuring a smooth base for the cookie dough.
- Add Egg and Vanilla: Beat in the egg and vanilla extract until they are fully incorporated, which helps bind the dough and adds flavor.
- Combine Dry Ingredients: In a separate bowl, whisk together the flour, baking powder, and salt. Gradually add these dry ingredients to the wet mixture while mixing, until a soft dough forms.
- Shape the Cookie Cups: Divide the cookie dough evenly among the muffin cups. Press the dough firmly into the bottom and slightly up the sides of each cup to create a thick shell that will hold the lemon filling.
- Bake the Cookie Cups: Bake the cookie cups for 8-10 minutes or until their edges turn a light golden color. Remove from the oven and gently press the center of each cup with the back of a spoon to maintain the cup shape. Let them cool slightly before adding filling.
- Prepare Lemon Filling: In a medium bowl, whisk together the eggs, granulated sugar, flour, fresh lemon juice, and lemon zest until the mixture is smooth and well combined.
- Fill and Bake Again: Pour the lemon filling into each cookie cup, filling almost to the top. Return the filled cups to the oven and bake for an additional 12-15 minutes or until the filling is set and the cookie edges are golden brown.
- Cool and Serve: Allow the Lemon Bar Cookie Cups to cool completely in the muffin tin to firm up. Once cooled, remove them carefully and dust the tops with powdered sugar for a sweet, decorative finish.
Notes
- Ensure the butter is softened to room temperature for easier creaming with sugars.
- Fresh lemon juice and zest provide the best flavor for the lemon filling.
- If you prefer thicker lemon fillings, slightly reduce the lemon juice or add a touch more flour for thicker consistency.
- Store leftover cookie cups in an airtight container in the refrigerator for up to 3 days.
- Allow the cookie cups to cool fully before removing from the tin to prevent breakage.

